EGAF00004914381 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914381
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7327408
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14829	0.20237715710657847	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	12421	0.1695142402333813	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10684	0.14580872253872038	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10079	0.13755205114823688	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	8524	0.11633035856608503	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	7472	0.10197330352015338	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1410	55.28918	8
TGCAGCG	1565	50.189053	7
GGTATCA	2450	48.38509	1
CAACGCA	6025	45.61302	5
GCTCTAG	1385	43.44063	1
CGCAGAG	6410	42.891567	8
ATCAACG	6440	42.590034	3
ACGCAGA	6525	42.223072	7
TCAACGC	6570	42.0032	4
GTATCAA	7280	40.013084	1
AACGCAG	7320	37.635315	6
GTCTCGC	840	36.876408	1
GCAGAGT	7490	36.788902	9
TGGTCCT	2945	35.751305	5
TCTGTCG	900	35.705837	8
CTCGCTC	850	33.598145	3
CATGCAG	2415	32.75959	5
TCTCGCT	940	31.647188	2
GCCTTTC	4790	29.068977	7
CTAGCCT	6720	28.23262	4