EGAF00004914393 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914393
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13951958
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGC	39471	0.2829065282449961	No Hit
GCGCCGAAAATGTACCGGGGCTAAACGTATCACCGAAGCTGCGGACTGTT	23203	0.16630640659898777	No Hit
GGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGGTTCA	20202	0.14479688083923417	No Hit
GGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCG	19524	0.13993734786185566	No Hit
TCCATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGGGT	19388	0.13896257428527237	No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	17517	0.12555227015448298	No Hit
GCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCG	16735	0.119947322089129	No Hit
GTAGTCGAAAGGGAAACAGCCCAGACCGCCAGCTAAGGTCCCAAAGTATA	15939	0.11424202968500909	No Hit
GGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGG	15320	0.10980537642100126	No Hit
GCTGTCTATATCAACCAACACCTTTTCTGGGGTCTGATGAGCGTCGGCAT	14567	0.10440828448594815	No Hit
CCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCG	14334	0.10273826799077233	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCCGT	1345	53.543793	1
TACCGAC	1375	50.289528	6
TCGTTCC	4475	49.54983	4
AGCGTAC	1590	48.57184	2
TACGCAT	3260	46.507866	2
ACCTCGT	4185	45.850845	1
CTACGCA	3035	45.42784	1
GCGCGTA	770	44.918594	2
CGTCGGT	13415	44.771446	9
CACCGTC	10755	42.984505	9
CCACCGT	10705	42.740044	8
CCTCGTT	6425	42.69721	2
CCGTTAG	1655	42.656063	3
TCTCAAC	15400	42.56846	9
CGTTAGT	1560	42.216244	4
CGTTCCT	5670	41.36043	5
GTACCGA	1660	41.09768	5
GTGCGAG	2225	40.246292	2
CCGTTTA	3535	40.20881	4
TACACGG	2880	39.96144	6