EGAF00004914447 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914447
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7347715
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	17870	0.24320486028649724	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	11848	0.16124740820785782	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	11058	0.15049576637090578	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10848	0.14763773499652613	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	9701	0.1320274398231287	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	9527	0.12965935668435696	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	8697	0.11836332791895167	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	8286	0.11276975222909436	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	8146	0.11086439797950791	No Hit
GTATACCCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCGG	8137	0.11074191092060592	No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG	8066	0.10977562412260139	No Hit
GGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAG	7787	0.10597852529663984	No Hit
TACTAGAAGTGTGAAAACGTAGGCTTGGATTAAGGCGACAGCGATTTCTA	7710	0.1049305804593673	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	7646	0.10405956137384208	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	7628	0.10381458725603811	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	7594	0.10335185836685282	No Hit
GGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTAATTCTAGG	7352	0.10005831744971055	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTCTAG	1130	69.57095	1
GGTATCA	1770	62.921757	1
GCAGCGC	1510	57.518562	8
TGCAGCG	1575	54.766705	7
CAACGCA	5745	50.987694	5
CGCAGAG	6140	47.280663	8
ACGCAGA	6155	47.26177	7
TGGTCCT	2790	46.52031	5
ATCAACG	6365	45.45987	3
TCAACGC	6505	44.664536	4
GCAGAGT	6690	43.307346	9
CATGCAG	2110	42.325207	5
AACGCAG	7200	40.81369	6
GTATCAA	7415	40.40074	1
TCTGTCG	390	33.557545	8
GTCGTGC	1095	31.002249	1
GCCTTTC	4440	30.14593	7
CTTTCTA	4895	28.682568	9
TCCAGTA	1640	28.67963	2
ACGGGAC	855	28.550127	3