EGAF00004914453 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914453
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11985499
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	44202	0.3687956588207133	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	38004	0.31708316858563834	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	28546	0.23817114331243114	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	21105	0.17608778741711129	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	20153	0.16814485571272417	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	19422	0.1620458188682841	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	18574	0.15497060239210733	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15372	0.1282549854620154	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	14387	0.12003672104098462	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	13028	0.1086980191646589	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	12454	0.10390889857819019	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCAA	44875	45.187164	9
GTACGGT	2920	44.890656	2
AGTAGCA	45065	44.806965	8
TACGGTG	2965	44.369526	3
GGTACGG	3075	43.165993	1
TGATCGT	3425	42.29411	5
TAGTAGC	47460	42.275154	7
CGACCTA	800	41.628494	1
GGTGTTA	5995	41.11572	2
GTACACC	8410	40.204086	7
GATAGTA	6285	38.76615	5
TTCGACG	430	38.724182	1
GTAGTAG	34800	36.830227	6
TGCTAGT	4465	36.58853	4
GCGCGGT	2795	36.19324	2
GGTAGTA	27990	34.869804	5
GTGCTAG	4650	34.521805	3
TACACCT	9925	34.4025	8
GGTACAC	8215	34.33679	6
TGAAGAG	32155	34.100994	8