EGAF00004914455 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914455
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9705234
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37382	0.3851736083849189	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	31785	0.3275036954286728	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	23409	0.2411997485068366	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	17641	0.18176789967145562	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	16730	0.1723812120346609	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15761	0.16239690871956308	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	15721	0.1619847599759058	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	13083	0.13480355033170763	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	11608	0.1196055654093451	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	10711	0.1103631298328304	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	10432	0.10748839234582082	No Hit
GGCATGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	9706	0.10000789264844104	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCTA	605	51.910755	1
GTAGCAA	36360	44.65747	9
AGTAGCA	36715	43.96704	8
TACGGTG	2225	43.77914	3
GCGCGGT	2170	43.15324	2
TAGTAGC	38140	42.212296	7
GTACACC	6660	40.77685	7
TTCGACG	320	40.149723	1
GGTACGG	2355	39.80559	1
GGTGTTA	4720	39.779747	2
GTACGGT	2380	39.745052	2
TGATCGT	2840	38.8124	5
TGCTAGT	3560	38.43923	4
GATAGTA	4950	36.953568	5
GTAGTAG	28635	36.244728	6
GTGCTAG	3595	35.025986	3
GGTACAC	6740	34.79837	6
GGTAGTA	23005	34.63472	5
TGAAGAG	26440	34.620827	8
GAAGAGA	26725	34.429276	9