EGAF00004914457 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914457
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7107046
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27191	0.3825921486930013	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	23512	0.3308266191044774	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	16589	0.233416246356081	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	12752	0.17942757089232292	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	12412	0.17464358609751504	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	11412	0.1605730425833743	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	11259	0.15842024942571079	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	9707	0.13658276589176432	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	8655	0.12178055411488824	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	8013	0.11274726517880988	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	7586	0.10673914309827176	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGTG	1870	44.468445	3
GTAGCAA	26395	43.89064	9
TGATCGT	2030	43.292423	5
GTACACC	5030	43.042812	7
AGTAGCA	27050	42.79275	8
GTACGGT	1900	42.01655	2
GGTACGG	1915	41.96899	1
GATAGTA	3785	41.417538	5
TAGTAGC	28045	41.32531	7
GGTGTTA	3520	38.608955	2
TGCTAGT	2480	38.508	4
TACACCT	5810	37.18254	8
GGTACAC	4955	37.083725	6
GCGCGGT	1835	37.030933	2
TGAAGAG	18955	37.021538	8
GTAGTAG	20670	35.85737	6
GAAGAGA	19950	35.365494	9
CGATCGT	205	34.759506	5
ATAGTAG	5175	34.589718	6
GTGATAG	3565	33.988827	3