EGAF00004914462 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914462
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11198823
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	42235	0.3771378474327168	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	27594	0.24640089409395968	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	25737	0.22981879435008484	No Hit
CGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGC	21704	0.19380608122835766	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	18612	0.16619603685137269	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	17428	0.155623497219306	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	14070	0.12563820322903577	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	12341	0.11019908074268162	No Hit
CTCCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACT	11973	0.10691302112730953	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGACAT	3390	53.01662	5
TGCGACA	3420	52.55496	4
CTGCGAC	4215	43.22838	3
CCGACTC	13670	42.234093	5
CGACTCC	13685	42.23278	6
CCTCGAC	1835	41.636482	1
ACCCGAC	14325	40.39318	3
CCCGACT	14825	39.610527	4
AACCCGA	15630	37.22016	2
GAACCCG	16250	36.134995	1
ACTCCCT	16660	34.89742	8
GACTCCC	16720	34.71624	7
GCTGCGA	5995	30.395407	2
CTCCCTT	19650	29.587326	9
GGTGTGC	8630	29.21293	7
CTCGACC	2635	28.268982	2
GTAGCAA	5605	26.954054	9
GCGCGGT	2780	26.346992	6
CGCGTCG	1430	26.330372	12-13
TTAGAGC	7055	26.172976	6