EGAF00004914478 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914478
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13869364
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	92304	0.6655243888616666	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	46064	0.33212770246710666	No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA	39698	0.2862279770002431	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	34036	0.245404187243193	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	33560	0.24197216253030782	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	33328	0.24029941098957386	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	32108	0.23150304512881775	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	32009	0.23078924166962522	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	25622	0.18473810334778148	No Hit
CGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGC	22146	0.15967567078057796	No Hit
GGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTC	16850	0.12149079078175468	No Hit
CCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTCATAATCCCACAGA	15306	0.11035834087273215	No Hit
AGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT	15189	0.10951475496641375	No Hit
GGCCCACTAGGCACTCGCATTCCACGCCCGGCTCCACGCCAGCGAGCCGG	14918	0.10756080812357365	No Hit
CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGT	14854	0.10709935942268152	No Hit
GGCAACAAAGGATAAGGGTTGCGCTCGTTGCGGGACTTAACCCAACATTT	14604	0.10529682543482166	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGACAT	2260	58.21837	5
TGCGACA	2365	55.630207	4
CTGCGAC	2615	51.03928	3
CGACTCC	10545	42.19699	6
TATTCGT	9795	40.830715	2
CCGACTC	11145	39.97712	5
GTAGCAA	12660	39.684425	9
TCAGACG	3065	38.58847	5
TTCGTAC	10580	37.889503	4
ATTCGTA	10835	36.954605	3
GCTGCGA	3655	36.777176	2
AGTAGCA	13665	36.696182	8
CCCGACT	12530	35.935143	4
TAGTAGC	13925	35.80821	7
TAGAGCC	10100	34.887592	7
GTAGTAG	12740	34.59131	6
ACGCATT	5400	34.56756	3
ACCCGAC	12980	34.54357	3
ACTCCCT	13105	34.20594	8
AACCCGA	13375	33.63067	2