FastQCFastQC Report
Thu 12 May 2022
EGAF00004914483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31763719
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGG1950450.6140496331679549No Hit
ATCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTA1774020.5585051297047428No Hit
ATGCTGTCTATATCAACCAACACCTTTTCTGGGGTCTGATGAGCGTCGGC1718710.5410921813028254No Hit
ATCTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAACCCTT1294690.40760025612869827No Hit
ATGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGGTT1234990.3888052277505666No Hit
ATTGCTGTCTATATCAACCAACACCTTTTCTGGGGTCTGATGAGCGTCGG991580.3121737728507169No Hit
ATCGTGCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTG954370.3004591496354693No Hit
ACCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTA936060.2946947112836504No Hit
ATCGCCGTTACTGAGGGAATCCTGGTTAGTTTCTTCTCCTCCGCTGACTA832130.26197499102671196No Hit
ATCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGG752100.23677957861294516No Hit
ATCCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGC751720.2366599452664847No Hit
ATTGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGG738590.2325262983216795No Hit
ATGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCC705070.22197337786548232No Hit
ATGTTCACTCGCCGTTACTGAGGGAATCCTGGTTAGTTTCTTCTCCTCCG674920.2124814162976319No Hit
ATCTCTCCTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTA628110.19774447696127773No Hit
ATCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC565930.17816868358519353No Hit
ATGCCGGCGACGGCCGGGTATGGGCCCGACGCTCCAGCGCCATCCATTTT546840.17215868204853468No Hit
ATCCGCCGCTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGC507760.15985533683886322No Hit
ATTCGCCGTTACTGAGGGAATCCTGGTTAGTTTCTTCTCCTCCGCTGACT507550.159789223673714No Hit
ATGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAA501540.15789712785206292No Hit
ATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGA485550.15286308256284473No Hit
ATTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACT449020.1413625400728422No Hit
ATGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCC448340.14114845934759718No Hit
ATGACCCATGTTCAACTGCTGTTCACATGGAACCCTTCTCCACTTCGGCC407560.1283099123248131No Hit
ATGGTGGTTCCGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCC406680.12803286668037833No Hit
ATGGTTAGTTTCTTCTCCTCCGCTGACTAATATGCTTAAATTCAGCGGGT392810.12366624953457118No Hit
ATGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA391150.12314364070529651No Hit
ATCTGCTGTCTATATCAACCAACACCTTTTCTGGGGTCTGATGAGCGTCG387270.12192212127301591No Hit
ATCTCTTTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTA384750.12112876329122545No Hit
ATCTCAGTACCGACTGACCCATGTTCAACTGCTGTTCACATGGAACCCTT375820.11831737964940439No Hit
ATCTCAGAACCGACTGACCCATGTTCAACTGCTGTTCACATGGAACCCTT375380.11817885682718701No Hit
ATTACCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAGA365920.11520061614951323No Hit
ATGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTG361960.11395391074955676No Hit
ATGCTGCGGATATGGGTACGGCCCGGCGCGAGATTTACACCCTCTCCCCC356610.11226959916123172No Hit
ATGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT350740.11042157878301342No Hit
ATTCCCTTACCTACATTGTTCCAACATGCCAGAGGCTGTTCACCTTGGAG333230.10490900010795336No Hit
ATGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTC327970.10325302273326369No Hit
ATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGGGTCTG323890.10196853838179339No Hit
ATGTGCCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT322970.10167889975352068No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)