FastQCFastQC Report
Fri 31 Mar 2023
EGAF00004914491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12081388
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG174740.14463569914317792No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA154360.12776677646641263No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA131480.10882855512959273No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)