EGAF00004914519 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914519
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9457545
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14796	0.1564465196834908	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	11975	0.12661848291496366	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	11199	0.11841339375070381	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	11063	0.1169753884332562	No Hit
TACTAGAAGTGTGAAAACGTAGGCTTGGATTAAGGCGACAGCGATTTCTA	9865	0.10430825335750452	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	9719	0.10276451235495046	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	9620	0.1017177290723967	No Hit
GGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTAATTCTAGG	9572	0.10121019778388576	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1785	65.98798	8
TGCAGCG	1955	59.336075	7
GGTATCA	1805	49.490936	1
CAACGCA	5110	48.453384	5
GCTCTAG	1890	47.265152	1
CGCAGAG	5365	45.9059	8
ACGCAGA	5390	45.581882	7
ATCAACG	6040	40.796196	3
TCAACGC	6040	40.696793	4
CATGCAG	3015	39.08675	5
GCAGAGT	6300	38.907322	9
AACGCAG	6750	36.573463	6
TGGTCCT	3505	36.509182	5
GTATCAA	8170	32.58345	1
GTCGTGC	1270	28.60472	1
CCGTATG	1895	28.25582	9
GCCTTTC	5465	26.669008	7
CTAGCCT	8215	26.589218	4
AATGCGT	4650	25.074074	6
AAATGCG	4705	24.920588	5