EGAF00004914521 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914521
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15071487
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	72780	0.48289860184333505	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	47311	0.3139106313796376	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	42974	0.2851344396209876	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	30194	0.20033855982491974	No Hit
GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGC	29195	0.19371014950283272	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	22650	0.15028377757284334	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	21835	0.14487621559836797	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	21278	0.14118049532869584	No Hit
GGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCG	21197	0.140643056653932	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	19479	0.12924404871264528	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	18098	0.12008105106019068	No Hit
GCCCGGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	18057	0.11980901420012503	No Hit
ACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCGAGCCCCGA	16222	0.10763370595084612	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	15632	0.103719029184048	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15590	0.10344035727861492	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACCTA	1025	55.005653	1
GTACACC	13445	52.169193	7
TACGCAT	3370	51.737965	2
CTACGCA	3235	50.967014	1
GCGCGGT	2430	49.329384	2
TGATCGT	5165	49.258152	5
TTCGACG	615	48.5344	1
GGTACAC	13570	47.15289	6
AGTAGCA	46620	44.96622	8
GCTCTGA	34940	44.00205	8
TCGACGT	725	43.785294	2
CCGTGCT	3140	43.456165	4
GTAGCAA	49045	43.255447	9
TACGGTG	3330	43.253456	3
GCGCGTA	770	43.072365	2
GTGCTCT	32270	42.504257	6
CGCGTAC	840	42.303223	3
TAGTAGC	49125	42.207836	7
TACACCT	16800	41.950863	8
CGTCGGT	8320	41.728725	9