EGAF00004914650 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914650
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6721475
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	36761	0.5469186450890615	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	29087	0.432747276453457	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	16644	0.2476242193863698	No Hit
CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGG	16543	0.24612157301782717	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	15924	0.23691228487794716	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	12851	0.19119315328852668	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	10124	0.150621701337876	No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA	9134	0.13589279138879487	No Hit
CGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGC	9049	0.13462818800932833	No Hit
CTCCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACT	7547	0.11228190240981331	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	1205	50.455982	4
GCGACAT	1245	49.216427	5
CGACTCC	7305	46.100544	6
CCGACTC	7505	45.06289	5
ACCCGAC	7965	42.403908	3
CTGCGAC	1510	40.896717	3
CCCGACT	8460	40.649754	4
GACTCCC	8325	40.450684	7
ACTCCCT	8405	39.95354	8
AACCCGA	8505	39.768337	2
GAACCCG	9000	37.61326	1
CTCCCTT	9940	33.83144	9
GCTGCGA	1945	31.50662	2
GTAGCAA	4160	31.170437	9
CGGCCTA	2020	30.567898	9
TAGTAGC	4120	30.550093	7
TAGAGCC	4615	29.640442	7
AGTAGCA	4430	29.16344	8
TTGGACG	1630	28.264938	7
TCGATCG	6030	28.004105	16-17