EGAF00004914651 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914651
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6721475
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	15774	0.23468063185535915	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14234	0.21176899415678851	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	9594	0.14273652732473155	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	7703	0.1146028215533049	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	7399	0.11008000476085979	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCAA	19700	42.59727	9
AGTAGCA	19660	42.539486	8
GTACACC	3665	41.937347	7
TAGTAGC	19870	41.39817	7
TCGACGT	350	37.95551	2
TACGGTG	1245	37.725742	3
CCGGTGC	2040	35.814793	3
TTCGACG	265	35.81215	1
GTAGTAG	14415	35.739223	6
CGTCGGT	2160	35.35838	9
GGTACGG	1335	35.18845	1
GCGCGGT	1145	34.392	2
CAGTACG	6655	34.215008	8
GGTACAC	3905	34.1362	6
CGCATTT	1880	34.065308	4
CTACGCA	990	34.030582	1
TGATCGT	1830	33.959133	5
GCTCTGA	12170	33.32721	8
GGTAGTA	11970	33.1717	5
TACGCAT	1060	33.12155	2