FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004914665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40871794
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG676340.16547842260117088No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA585990.14337271322124984No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA565900.1384573429783875No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)