EGAF00004914671 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914671
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12908732
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	33402	0.25875508144409537	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	19462	0.15076616355502617	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	19194	0.14869004949517892	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	17843	0.13822426555915793	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	17659	0.13679887381657627	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	17254	0.1336614626440459	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	15787	0.1222970621746582	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	15774	0.1221963551493671	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	14468	0.1120791724547384	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	14412	0.11164535757656134	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	14008	0.10851569309828417	No Hit
GGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAG	13724	0.10631563193038635	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	13710	0.1062071782108421	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	13441	0.10412331745674169	No Hit
GTTCTTGGGTGGGTGTGGGTATAATGCTAAGTTGAGATGATATCATTTAC	13217	0.10238805794403354	No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG	13060	0.10117182694628721	No Hit
GTATACCCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCGG	13004	0.10073801206811019	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTCTAG	1980	67.671715	1
GGTATCA	3605	63.433086	1
GCAGCGC	3080	59.294487	8
TGCAGCG	3385	53.775074	7
CAACGCA	11745	49.96076	5
ACGCAGA	12530	46.953014	7
ATCAACG	12515	46.74457	3
CGCAGAG	12590	46.682907	8
CATGCAG	4050	46.140232	5
TCAACGC	12835	45.532246	4
GTATCAA	13720	43.96886	1
GCAGAGT	13835	42.528244	9
AACGCAG	14420	40.88117	6
TGGTCCT	5130	40.022747	5
TAGATGG	3340	31.52427	7
GTACACT	3380	31.326954	6
GTCGTGC	1605	29.31176	1
CTAGCCT	11305	27.689726	4
TCCAGTA	3770	27.309153	2
CTTTCTA	8395	26.85832	9