EGAF00004914693 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914693
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11561710
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	49937	0.4319170780100867	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	37832	0.3272180326266616	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	26532	0.22948162512292733	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20326	0.17580444415229235	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	19807	0.17131548879880223	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	16446	0.14224539449614287	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	16366	0.14155345532797484	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	15021	0.12992022806314982	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	14188	0.1227154114746002	No Hit
GCCCGGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	13372	0.11565763195928629	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	12702	0.10986264142587904	No Hit
GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGC	12669	0.10957721651900973	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	12088	0.10455200831018942	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGTG	2790	49.269985	3
GTACACC	9075	48.937756	7
TTCGACG	350	48.764515	1
CCGTGCT	2780	48.08191	4
TACGCAT	2800	47.741154	2
CGCATTT	4800	46.6099	4
CGACCTA	910	45.325993	1
AGTAGCA	47500	45.141926	8
GTAGCAA	47795	44.942833	9
GGTACAC	9040	44.198204	6
CTACGCA	2920	43.837963	1
TAGTAGC	48150	43.695827	7
GGTGTTA	6740	43.534397	2
GCTCTGA	29325	43.380604	8
TGCTAGT	4065	43.260426	4
GTTTCCG	4170	42.963657	6
GCGCGGT	2295	42.9618	2
CGGTGCT	4330	41.926468	4
TGCTCTG	30360	41.65193	7
TGATCGT	4290	41.539833	5