EGAF00004914712 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914712
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12992624
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	135036	1.0393281603469784	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	61996	0.4771630426617441	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59583	0.45859096669002347	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	23087	0.1776931280394168	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22825	0.17567659927663573	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	16051	0.12353932508167711	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14240	0.1096006472595528	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	14161	0.10899260996085162	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	13551	0.10429763841391855	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	16915	92.76532	1
GTATCAA	52520	72.03962	1
GCAGCGC	2850	56.784615	8
ATCAACG	68330	55.482628	3
CAACGCA	69455	54.634106	5
TCAACGC	69880	54.293938	4
TGCAGCG	3075	53.01948	7
GCTCTAG	2125	52.943806	1
AACGCAG	72955	52.060078	6
ACGCAGA	78860	48.085835	7
TATCAAC	79560	47.80247	2
CGCAGAG	79360	47.780304	8
GCAGAGT	83630	45.34784	9
CATGCAG	4260	38.84386	5
AGAGTAC	91375	31.020658	10-11
TGGTCCT	4270	30.946552	5
CAGAGTA	87745	30.65962	10-11
GTGGTAT	5975	30.186792	1
GTCGTGC	1785	30.01349	1
TGGTATC	6025	29.83748	2