EGAF00004914731 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914731
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6955489
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	22795	0.3277267780884996	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	21911	0.31501739130059725	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	13673	0.19657855831559795	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	11959	0.17193614999606785	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	11682	0.16795368377406678	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	11073	0.1591980089394146	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	9956	0.14313874984203123	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	8521	0.12250756201325312	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	8173	0.11750431925059476	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCGACG	330	60.34531	1
TCGACGT	450	51.625427	2
GTACACC	4060	47.061787	7
CGACCTA	515	46.03318	1
AGTAGCA	25290	45.856094	8
TAGTAGC	25385	45.423008	7
GTAGCAA	25780	45.188763	9
GTTTCCG	2635	42.82386	6
GGTACAC	4150	42.613792	6
TCCGTTT	2340	42.34612	3
GGTGTTA	3940	41.394466	2
TGATCGT	1675	41.3261	5
CAGTACG	7445	41.20302	8
TTCCGAC	3130	41.050117	8
GCTCCGT	1820	40.380203	1
GTTCCGT	700	39.96337	1
TACGCAT	1190	39.841267	2
CTACGCA	1075	39.69559	1
GTAGTAG	18720	39.434124	6
AGCGTAC	440	38.79091	2