EGAF00004914732 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914732
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12329290
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	127209	1.0317625751361188	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58081	0.47108146535607487	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	56282	0.45649019529916157	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22243	0.18040779314948388	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	21684	0.1758738743269077	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	15037	0.1219616052505862	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14011	0.11363995818088471	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	13254	0.10750010746766439	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12819	0.10397192376852195	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	15580	91.670876	1
GTATCAA	49505	72.780525	1
GCAGCGC	2535	57.23477	8
ATCAACG	64580	55.87303	3
CAACGCA	65795	54.89394	5
TCAACGC	65980	54.71453	4
AACGCAG	69075	52.3355	6
TGCAGCG	2820	51.239548	7
GCTCTAG	2055	51.23516	1
ACGCAGA	74615	48.429634	7
CGCAGAG	75075	48.132896	8
TATCAAC	75485	47.99888	2
GCAGAGT	79340	45.560455	9
CATGCAG	3800	38.97636	5
TGGTCCT	4210	32.778675	5
TAGCGTG	1995	32.190594	9
AGAGTAC	86805	31.130743	10-11
TCTGTCG	940	30.364178	8
CAGAGTA	83525	30.292229	10-11
AGGACCG	820	29.740995	5