EGAF00004914734 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914734
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1723467
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	12158	0.7054385143434716	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	10466	0.6072643108339179	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	7121	0.4131787843921583	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	6281	0.3644398181108196	No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA	3112	0.1805662655565787	No Hit
GGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTC	2888	0.16756920788155502	No Hit
CGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGC	2551	0.1480155987901132	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	2476	0.14366390537213652	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	2237	0.12979650901351752	No Hit
AACTGCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCCTGCG	1983	0.1150587739713032	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACTCC	3050	63.02768	6
GAACCCG	3095	62.132923	1
CCGACTC	3140	61.369034	5
AACCCGA	3255	58.630238	2
CCCGACT	3310	58.497715	4
ACCCGAC	3295	57.636654	3
ACTCCCT	3410	57.0463	8
GACTCCC	3415	56.699104	7
TTGGACG	575	51.682434	7
CTCCCTT	3840	50.90011	9
GCGACAT	130	42.861633	5
TGCGACA	130	42.861633	4
GCCATCG	2260	41.59311	38-39
CGTCAGG	630	39.06305	4
ACGTCAG	620	38.944176	3
CGGAGGC	2465	38.812588	34-35
GGACGCG	835	36.14055	9
CATCGCC	2995	36.055565	40-41
TCGATCG	2665	35.71285	16-17
CGTACGA	500	35.289413	5