EGAF00004914739 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914739
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7607653
Sequences flagged as poor quality	0
Sequence length	101
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	33837	0.44477580667782823	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	22463	0.2952684619027708	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20842	0.27396097061735075	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	13002	0.17090684866935968	No Hit
GGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGC	11982	0.15749929708939145	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	11540	0.1516893580714052	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	11534	0.1516104901209348	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	11300	0.14853464005258915	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	10761	0.14144966916866478	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	9488	0.12471651901052795	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	9407	0.12365180167917753	No Hit
GCCCGGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	9282	0.12200871937771084	No Hit
GGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGC	9151	0.12028676912577375	No Hit
GGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCG	9072	0.11924834111124678	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	8208	0.107891356243509	No Hit
GGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGG	7883	0.1036193422596956	No Hit
GCCCCGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	7779	0.1022522977848753	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACGT	525	56.029854	2
CCGTGCT	1670	55.39469	4
TTCGACG	380	54.940582	1
GTACACC	6685	54.002777	7
CGACCTA	625	53.901707	1
TACGCAT	2510	52.170193	2
GCGCGGT	1285	50.582996	2
CTACGCA	2410	49.614395	1
CGCATTT	3975	48.69373	4
GGTACAC	6555	46.67882	6
TACGGTG	1965	45.874012	3
TGCTAGT	2175	45.368465	4
GCTCTGA	19910	43.983856	8
GGTGTTA	4110	43.635212	2
TGCTCTG	20100	43.56809	7
TGATCGT	2890	43.336155	5
GTAGCAA	28710	43.257717	9
CGCTGTC	2075	42.982307	4
TAGGCGC	520	42.87842	5
AGTAGCA	28700	42.87666	8