EGAF00004914749 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914749
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9399381
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	24605	0.26177255715030595	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	23839	0.2536230843286383	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	14321	0.152361096970109	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	13693	0.14567980593615687	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	12507	0.13306195376057212	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	12238	0.13020006317437288	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	11223	0.11940147973574003	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	11103	0.11812479992033519	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	9644	0.10260250116470436	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACACC	5925	60.57231	7
TGCTAGT	3020	55.661285	4
TAGTAGC	35665	54.261013	7
GGTGTTA	5140	53.810097	2
GGTACAC	5850	53.19591	6
TTCGACG	700	53.142483	1
AGTAGCA	37705	52.175316	8
GTAGTAG	24935	49.058044	6
GTGCTAG	3415	49.051826	3
GTAGCAA	40200	48.782475	9
GGTGCTA	3700	48.75859	2
TTCAGTA	9595	47.831318	6
GATAGTA	5150	47.7764	5
TGATCGT	2405	47.162827	5
TGATAGT	4295	47.127937	4
TGCTCTG	19905	46.14209	7
TACACCT	7485	46.06848	8
GGTAGTA	20355	45.522385	5
CAGTACG	12405	45.117424	8
GTGCTCT	17910	44.78669	6