FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004914766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1373386
Sequences flagged as poor quality0
Sequence length101
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACNCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG77810.5665559427575351No Hit
CTCANGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT63200.46017652721084973No Hit
GAACNCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT53080.3864900326637959No Hit
CACGNCGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC51970.37840781834094717No Hit
AACTNCTTGGACGCGGATATCCAATACCGCGCTTACCCTATCCTCCTGCG51200.3728012372341061No Hit
TACANACCCGGCCTATCAACGTCGTCGTCTTCAACGTTCCTTCAGGACTC14070.10244752749773188No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)