EGAF00004914779 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914779
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18913574
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC	39668	0.20973296744443964	No Hit
GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT	38262	0.202299152978702	No Hit
CGTGCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCA	27380	0.14476375538541789	No Hit
TCCATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGGGT	26985	0.1426753082204347	No Hit
CCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAA	26059	0.13777935360075258	No Hit
GGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGGTTCA	23248	0.12291701187728983	No Hit
CTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGG	23246	0.1229064374612646	No Hit
CCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCG	21721	0.11484344524202565	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGACC	5060	53.788116	9
CGCTCCG	4080	50.20625	5
TCCGGAT	13385	49.487434	8
CGGACTA	1735	48.920143	5
GTACCGA	1965	46.81374	5
TACCGAC	2040	46.020325	6
TACCCGT	2165	45.777176	1
ACGTACG	1315	45.071655	4
ACGGTTA	2150	44.5484	4
CGGTTAT	2465	44.05069	5
GACCCGT	1945	42.42191	1
CCACCGT	17490	41.99316	8
CACCGTC	17780	41.842358	9
AACCGAC	2565	41.77685	6
CCGTTTA	6620	40.32456	4
CGTACGA	1545	39.897808	5
CCTATCG	1335	39.423187	2
ACCCGTT	4585	39.296543	2
GAACCGA	2525	39.06035	5
TTTCCGA	7095	38.694057	7