EGAF00004914780 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914780
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6175363
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGG	70810	1.1466532412750472	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	67522	1.0934094076736864	No Hit
ACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCAT	22870	0.3703426017223603	No Hit
AAGGCTAAATACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAA	22687	0.36737921317337946	No Hit
GGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCC	17384	0.28150571877313124	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	16172	0.2618793421536515	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	15119	0.24482771296197486	No Hit
AACACGGACCAAGGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAA	12875	0.20848976813184908	No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	10150	0.16436280749811794	No Hit
CCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCG	10053	0.16279204963335758	No Hit
GATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGG	8888	0.14392676187618444	No Hit
GACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAA	7926	0.12834873026897367	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	7122	0.11532925270951683	No Hit
TGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTA	6510	0.10541890411948254	No Hit
CAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTGGAGCCGGGCGT	6456	0.10454446159683245	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	2410	72.11753	4
GCGACAT	2530	69.62442	5
TCAGACG	11235	67.23653	5
CAGACGT	11845	65.05664	6
AGACGTG	11855	64.961716	7
CTGCGAC	2700	63.66028	3
CGACATC	2825	63.362328	6
GCTGCGA	2850	60.30974	2
GGTAGTA	13905	59.92587	5
GTAGCAA	14845	57.694763	9
GTAGTAG	14815	57.23847	6
GACGTGG	13780	56.021065	8
AGATCAG	13495	55.429863	2
GTGGTAG	15175	54.830112	3
GATCAGA	13685	54.69537	3
ACGTGGC	14260	54.00219	9
ATCAGAC	13985	53.79672	4
GGTGGTA	15555	52.90419	2
GGCTGCG	3360	51.464542	1
TAGTAGC	16505	50.9749	7