FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004914794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12757125
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC732330.5740556747699815No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC554490.43465122431582354No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC217770.17070460624944883No Hit
CAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGA147450.11558246862047679No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)