EGAF00004914821 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914821
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14093934
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	52922	0.3754948760225499	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	43236	0.3067702743605866	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	35034	0.2485750252555461	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	25939	0.1840437169636242	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	24768	0.1757351779850821	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	22607	0.1604023404678921	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	19698	0.13976225516594587	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	19573	0.13887534878480345	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	18581	0.13183685974405726	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	17721	0.12573494384179748	No Hit
CGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15516	0.11008991527844533	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCAA	46225	56.343113	9
GCTAGTA	4740	53.9264	5
AGTAGCA	48865	53.26612	8
GTACGGT	1795	52.1125	2
GATAGTA	7250	51.836536	5
CGACCTA	1295	51.44355	1
TAGTAGC	50555	51.237656	7
GGTGTTA	7735	48.496105	2
AATACCG	3235	46.11926	8
ATAGTAG	9295	45.90124	6
GTTAGTA	8550	44.677353	5
GTAGTAG	35040	44.026653	6
GGTAGTA	28630	42.416706	5
GGTACGG	2140	41.58153	1
TGCTAGT	6135	41.1996	4
GTGATAG	8185	41.03928	3
CGGTGAA	13605	40.823803	5
TTCCGAC	5435	40.302162	8
CAGTACG	8775	39.690247	8
CGCCCTA	1410	39.48566	1