EGAF00004914861 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914861
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11125769
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	42460	0.3816365412584065	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	28831	0.25913714368867447	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20992	0.18867909265417968	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	20172	0.18130881559737577	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	17907	0.1609506722636431	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	15901	0.14292045790273014	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	15480	0.13913644980405399	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	15288	0.13741072639563162	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	13407	0.12050402987874365	No Hit
CGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	12414	0.1115788041258092	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTAGTA	3700	56.90277	5
GTAGCAA	36200	56.89303	9
AGTAGCA	38570	53.38485	8
CGACCTA	1245	52.950016	1
TAGTAGC	39885	51.41149	7
GTACGGT	1610	50.372192	2
GATAGTA	6070	50.075066	5
ATAGTAG	7090	49.350754	6
AATACCG	2935	48.460846	8
GGTGTTA	5890	46.862816	2
GGTACGG	1755	46.48063	1
TGCTAGT	4610	45.259094	4
GTGATAG	6155	44.31617	3
GTTAGTA	6615	43.72725	5
GTAGTAG	27775	43.630527	6
GGTAGTA	22480	42.12442	5
CAGTACG	6745	41.33074	8
GGTGCTA	5125	41.180046	2
GTGCTAG	5080	40.994278	3
ATACCGG	3435	40.992794	9