FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004914917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004914917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74080237
Sequences flagged as poor quality0
Sequence length41
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1621130.2188343430920719No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCC896030.12095398668878449No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAG809310.10924776064093855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)