EGAF00004914928 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004914928
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17867289
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	80655	0.4514115151996478	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	45721	0.255892206142745	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	38374	0.21477236977585126	No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCA	31500	0.17629982925781296	No Hit
CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC	30429	0.17030563506304733	No Hit
TGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCA	24513	0.13719484808243712	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	22253	0.1245460349356861	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	20230	0.113223668123351	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	2965	56.929577	4
GCGACAT	3180	51.380882	5
CGACTCC	12590	49.210827	6
CCGACTC	12890	48.21204	5
CTGCGAC	3610	47.061577	3
GAACCCG	13405	46.105198	1
ACCCGAC	13410	45.935608	3
AACCCGA	13585	45.02114	2
CCCGACT	13945	44.212593	4
TATTCGT	10070	42.341095	2
TCAGACG	4400	39.495506	5
TAGAGCC	13090	39.430573	7
TTCGTAC	10945	38.956127	4
ATTCGTA	10970	38.91731	3
GACTCCC	16010	38.84606	7
GCTGCGA	4360	38.714725	2
AGACGTG	4775	36.987144	7
ACTCCCT	16935	36.80792	8
GTAGCAA	14970	36.749947	9
TAGTAGC	15150	36.437996	7