EGAF00004915631 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004915631
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3595228
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17653	0.4910119747621013	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8919	0.24807884228761012	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8451	0.2350615871928011	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	5628	0.15654083690936987	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5059	0.14071430240307428	No Hit
TGAAATACAGAGAAAAAGGCATCCCAAAAAAAAAAAAAAAAAAAAAAAAA	5032	0.1399633069168353	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	4807	0.13370501119817713	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4416	0.12282948397153116	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	4186	0.11643211501468057	No Hit
TCGTGAGACAGTTCGGTCCCTATCTGCCGTGGACGTTTGAGATTTGAGAG	4011	0.11156455167794642	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	3637	0.10116187346115463	No Hit
GTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGG	3630	0.10096717092768524	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACAGAGA	2470	64.413	7
GTATCAA	28700	58.61334	1
CAGAGAA	2860	54.874252	8
AGAGAAA	3210	48.891083	9
AAAGGTC	1630	48.58288	7
GAAATAC	3835	46.182575	2
TGAAATA	4160	42.630493	1
TATCAAC	40245	41.914925	2
CAACGCA	40345	41.415565	5
AATACAG	4110	40.988712	4
TACAGAG	4045	40.222412	6
ATCAACG	42155	39.775043	3
TCAACGC	42530	39.407406	4
AACGCAG	42615	39.361496	6
GGTATCA	20540	38.76428	1
ACGCAGA	43525	38.472385	7
CGCAGAG	43580	38.42383	8
TCATAAA	3025	37.395016	1
GCAGAGT	44890	37.318565	9
CTATTGA	2785	36.70636	9