EGAF00004916292 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004916292
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1794548
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	4851	0.27031876550529715	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3215	0.1791537479075511	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	2832	0.15781132630612277	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	2629	0.1464992856139819	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	2426	0.13518724492184103	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	2199	0.12253782010846184	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	2163	0.12053174392660437	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	2033	0.11328757993656342	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	3400	83.092545	1
GTATCAA	6845	82.22716	1
TATCAAC	10200	55.692104	2
ATCAACG	10565	54.928078	3
AACGCAG	10550	54.80602	6
TCAACGC	10715	54.09194	4
ACGCAGA	10735	53.524662	7
CGCAGAG	10770	53.283867	8
CAACGCA	10995	53.111774	5
GCAGAGT	11075	51.48995	9
ACTGTGC	3320	35.784832	8
CTGTGCA	3145	32.28044	9
GCTATTG	1560	30.924543	8
TTTAGGG	1570	30.26642	2
CAGAGTA	11090	30.0601	9
CTATTGA	1640	29.415209	9
GGGCTAT	1650	29.238565	6
TTAGGGC	1795	28.879982	3
CACTGTG	3735	28.724255	7
TAGGGCT	1950	27.692078	4