FastQCFastQC Report
Thu 12 May 2022
EGAF00004916347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004916347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50792949
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1346450.26508600632737434No Hit
CCATTTGATGATGATTCCATTCAATGATTCCATTCGATTCTATTCGAAAA1345570.2649127539336218No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT775450.15266882810840537No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT619170.12190077799971803No Hit
CCATTTGATGATGATTCCATTCAATGATTCAATTCGATTCCATTCCAAAA615910.12125895663195299No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT603440.11880389146139163No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)