EGAF00004916442 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004916442
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11644955
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	23640	0.20300636627621146	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	22277	0.19130172679928775	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	18433	0.15829172375505102	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	14733	0.126518307713512	No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	13858	0.11900432419017506	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	13478	0.11574110848861158	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	13266	0.11392057762352882	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	12606	0.10825288719449754	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	12434	0.10677585271905302	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	12131	0.1041738675675432	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	11820	0.10150318313810573	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTACGA	7680	50.43044	9
CAGTACG	7945	48.808033	8
GTAGCAA	24550	48.2941	9
CGACCTA	985	48.167343	1
ATACCGG	3025	47.32749	9
AATACCG	3125	45.96471	8
AGTAGCA	26800	44.27494	8
TTCCGAC	4790	41.86362	8
GTACGGT	1520	41.826374	2
TAGTAGC	29015	40.829647	7
GCTAGTA	3020	39.886246	5
CGGTGAA	9380	38.626637	5
TTTCCGA	5320	38.316757	7
GCGGTAC	5310	37.689945	4
GTACACC	6835	37.38369	7
TCAGTAC	10410	37.250706	7
GATAGTA	4515	35.292133	5
GTAGTAG	20320	34.901154	6
CCTATTC	13065	34.738426	4
GGTGTTA	4845	34.66558	2