FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004916585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004916585
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences924779
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC17440.18858559720754905Illumina Single End Adapter 1 (95% over 21bp)
CTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGCT11330.12251575781889511Illumina Single End Adapter 1 (95% over 22bp)
TCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC11000.11894733768824768Illumina Single End Adapter 1 (95% over 21bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)