EGAF00004916672 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004916672
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3513438
Sequences flagged as poor quality	0
Sequence length	150
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26277	0.7478999202490553	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23742	0.6757483695457269	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	17979	0.511720998065143	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13584	0.38662984802919537	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11501	0.32734318920669725	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	11032	0.31399444077282707	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10194	0.2901431589229695	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	8455	0.2406474797619881	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8295	0.2360935357333757	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7535	0.21446230159746665	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	5573	0.1586195629466067	No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA	5414	0.15409408106817313	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	5235	0.14899935618616295	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	4776	0.13593522925408105	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	4068	0.11578402692747104	No Hit
TTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTA	3613	0.10283374859610445	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	4030	74.910225	1
GTATCAA	9595	71.74189	1
ATCAACG	11385	59.199806	3
TCAACGC	11415	59.16786	4
CAACGCA	11410	59.1189	5
AACGCAG	11930	56.84377	6
ACGCAGA	13285	51.046	7
CGCAGAG	13285	51.046	8
TCTGTCG	1055	49.813015	8
GCAGAGT	14550	46.65746	9
TATCAAC	14790	46.057507	2
CGTCAAT	260	41.532715	6
ACGGGAC	810	40.004147	3
TAGCGTG	280	38.566093	9
ATAGGGG	7320	38.26626	3
GGGTTAG	7810	37.976818	7
GTCTCGC	905	37.86998	1
TAGGGGT	7450	37.403618	4
GGGGTTA	8070	36.842484	6
GTACTTT	15530	35.966908	1