FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004916684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004916684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1123
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.5342831700801425No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.44523597506678536No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC40.3561887800534283No Hit
CTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCG40.3561887800534283No Hit
ACTACAACCCTCGTAATAGGGCTGCGTGCGTCCTAAATACACTCGCTGTT40.3561887800534283No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT40.3561887800534283No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTG40.3561887800534283No Hit
ATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGG40.3561887800534283No Hit
GGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCATATCACCTTAC30.26714158504007124No Hit
GCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATA30.26714158504007124No Hit
GGTATCAACGCAGAGTACATGGGCTGCTCCCCGTTCGCTCGCCGCTACTG30.26714158504007124No Hit
TTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCCCAGTAAT30.26714158504007124No Hit
GTATACGGACAACTGATGGACCCACGTTGCGAGTCCAGTAAATCAGGACG30.26714158504007124No Hit
GTTATGAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAA30.26714158504007124No Hit
CAATTTGAAGTTTGCCTTCTCTCGTTCTCGCCCGCTTTGCAAAAATATCT30.26714158504007124No Hit
GAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTC30.26714158504007124No Hit
GTGGAAGATGTTACAACGATTATCTTACACATTAAAAAGCTTGCATTGAA20.17809439002671415No Hit
GTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAA20.17809439002671415No Hit
ATGCAGCCGATGCGGTGCTCAAGCGCCATCCGCAGTTCTTCCCTGCTCTT20.17809439002671415No Hit
GCTTAAAGCTTTCGGAGCAAATCGCGTTCTGCGACAACGACAAAAAAAAC20.17809439002671415No Hit
CCTTAGGAGCGGATGTTATTGAGAAGCACTTTACCTTAGATAAAAATATG20.17809439002671415No Hit
GACGTTCTACTCCGCCATATGAGATAATATCCTTATCTTGAGACGCATAG20.17809439002671415No Hit
GCTTGACACTGAACATTGAGCCTTGATGTGTAGGATAGGTGGGAGGCTTT20.17809439002671415No Hit
ACATGGGAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCG20.17809439002671415No Hit
GCTGACAGCTATGAAGAAGACCTCCTGTTTGCCACGCTGGACCCGATGAC20.17809439002671415No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCTG20.17809439002671415No Hit
CCGATGCAGTGTCCAGTCATGACCTCGATCCATCGCGTATAGGGACTGTC20.17809439002671415No Hit
CATATCTTCTTCCGTCTTGTTCGCAAGCTCTTGAACCGTGTTAATACCCG20.17809439002671415No Hit
GCTATGAAGAAGACCTCCTGTTTGCCACGCTGGACCCGATGACCAGAAAA20.17809439002671415No Hit
TGACGAGGCACTACGGTGCTGAAGCAACAAATGCCCTGCTTCCAGGAAAA20.17809439002671415No Hit
CGATAGTGATGTAGAGATCTTAAATCCTGATCTTCATATCGCGACTCTTG20.17809439002671415No Hit
CATAAGGCATCATTATAACTAAAAATGGGATATATTCCTTATAAACTACT20.17809439002671415No Hit
ATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCCTGTCTCTTATAC20.17809439002671415No Hit
GGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA20.17809439002671415No Hit
CTCCGATAGCGACTGGACACAACATGGCAGTTGGCCCACATGGAATATCG20.17809439002671415No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG20.17809439002671415No Hit
TTTCCAGACGCTTCCACTAACACACACACTGATTCAGGCTCTGGGCTGCT20.17809439002671415No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA20.17809439002671415No Hit
GTACATGGGGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGA20.17809439002671415No Hit
ATTCTATGGAAGAGCTAGCATCTCTGACGAAAACAGCAGACGGAAAAGTA20.17809439002671415No Hit
ATATACCACTTCTACCTACAACTGCTTCAATCCTCGAGAGACTCGGAACC20.17809439002671415No Hit
TCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGC20.17809439002671415No Hit
TCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCT20.17809439002671415No Hit
ACCACGATCAGCCGACGGTCTGGATGCCGACGCCCGTATACTGTGAGCAG20.17809439002671415No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC20.17809439002671415No Hit
TCTGAGACCTATCCGAGTTCAGTGCGACCGTACAGCTCTGGAACCCAAAC20.17809439002671415No Hit
AAAGAAATCAACCGAGATTCCCCCATGTACTCTGCGTTGATCTGTCTCTT20.17809439002671415No Hit
CCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCC20.17809439002671415No Hit
ACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGG20.17809439002671415No Hit
TATCAACGCAGAGTACATGGGGTAGGTGGGGTAACGGCTGTCTCTTATAC20.17809439002671415No Hit
GATTAACGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAG20.17809439002671415No Hit
GCTGAGGCGTGATGACGAGGCACTACGGTGCTGAAGCAACAAATGCCCTG20.17809439002671415No Hit
CGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATC20.17809439002671415No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAAGGTATTA20.17809439002671415No Hit
GGTATCAACGCAGAGTACATGGGCCCCCGTCAATTCATTTGAGTTTTAAC20.17809439002671415No Hit
CCTGGGAACTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGT20.17809439002671415No Hit
GGTTTATACTTCAATATAAGCCTTGGTAGGGATAGATAGCCACCTATATA20.17809439002671415No Hit
GGGTTTCGGGTCTATACCCTGCAACTTAACGCCCAGTTAAGACCTGTCTC20.17809439002671415No Hit
ACGCAGAGTACATGGGAAACGCAGAGTACATGGGGGAATTCGAGCTCGCA20.17809439002671415No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT20.17809439002671415No Hit
ATCTAGTGAAACCTTCAAGCATGAATTGTAGCTGACGGCAGGCCCCTAAA20.17809439002671415No Hit
TAGGTACCAAGAAAAAAACGAACCTTTGGGTTCCAGAGCTGTACGGTCGC20.17809439002671415No Hit
CAACTATACCAAAGAATATCCCAATTATCCATAAAACTGTAACTAAGTGA20.17809439002671415No Hit
GCTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTAT20.17809439002671415No Hit
CTCCTATGTTTTGCTGGTAGATACCGGCGCGCTAGCAAACCCATAGTTCT20.17809439002671415No Hit
GGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCA20.17809439002671415No Hit
GTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGG20.17809439002671415No Hit
GACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA20.17809439002671415No Hit
TTATAACTAAAAATGGGATATATTCCTTATAAACTACTGCTAAGACAGCT20.17809439002671415No Hit
GGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTT20.17809439002671415No Hit
TGCTATTAATGATATTAAAATCCCAACTATACCCTGTCTCTTATACACAT20.17809439002671415No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA20.17809439002671415No Hit
GTTTCCAGTTTCGTTTCCCCGGGACCTCTTGCCCCAATTCCTCCGCCTTG20.17809439002671415No Hit
GGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGC20.17809439002671415No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGTCGGTGCTTCTTCTGCGG20.17809439002671415No Hit
CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTG20.17809439002671415No Hit
GCTAAGACAGCTAAGAAAGCTCCAATTGGTAGAGTTCCAACATCTCCTGG20.17809439002671415No Hit
CTTTAGCGGCCTGTCATATTAACAACCGTTGCGACGGGTCCGAGACATTA20.17809439002671415No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT20.17809439002671415No Hit
GGTATTCTCTACCTGACCACCTGTGCCCATGTACTCTGCGTCTGTCTCTT20.17809439002671415No Hit
GGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTT20.17809439002671415No Hit
ACACCGTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAA20.17809439002671415No Hit
GATCTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGCTTCCTTCCG20.17809439002671415No Hit
TGTCAGCACTCGTCAGGCGGTTGAACCATGTTGATTTCCCTGCGTTTGTA20.17809439002671415No Hit
GAATGCAGCAATCAATGTCGTCGGAAGATCCTGAATAAATCCTACTGTAT20.17809439002671415No Hit
CCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGACTG20.17809439002671415No Hit
GACGAGGCAGTTTCCAGAAACGTGTATCACATCTAGGCATGGAACTGTCT20.17809439002671415No Hit
CGTTAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTTAAAGGCTG20.17809439002671415No Hit
CTTTAGGTGGGCCTTGGCTTCCTTCCGCAGTCAAAACCGCGCAATTATCC20.17809439002671415No Hit
TCGTAATAGGGCTGCGTGCGTCCTAAATACACTCGCTGTTGAGATACTAA20.17809439002671415No Hit
CATCTAGGCATGGAATCTTATGCCAGCTAACGGAACAAGCTTTGTGCCAT20.17809439002671415No Hit
CGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGA20.17809439002671415No Hit
TTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGTTAATGATA20.17809439002671415No Hit
CGTAATAGGGCTGCGTGCGTCCTAAATACACTCGCTGTTGAGATACTAAA20.17809439002671415No Hit
TATCAACGCAGAGTACATGGGAAATCCGGAAAATCAAGGCTGAGGCGTGA20.17809439002671415No Hit
CTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATT20.17809439002671415No Hit
GTCCTAAATACACTCGCTGTTGAGATACTAAAATTATCTGTGGATTGCCG20.17809439002671415No Hit
GTCTAAGGTTTTTAAATCAGCAACAATAAAGCCATCAAAATATTCTCTCA20.17809439002671415No Hit
CTCCCCAGGCGGTCGACTTAACGCGTTAGCTCCGGAAGCCACGCCTCAAG20.17809439002671415No Hit
GAAAAACGGTGTGCTTCAAATTGCGCTTGTCGGCTATACAAACGCAGGGA20.17809439002671415No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT20.17809439002671415No Hit
GTACATGGGCTGCTCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTT20.17809439002671415No Hit
GAGTAAAGTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC20.17809439002671415No Hit
GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT20.17809439002671415No Hit
TCGCCGGTTATAACGGTTCATATCACCTTACCGACGCTTATCGCAGATTA20.17809439002671415No Hit
GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGGGT20.17809439002671415No Hit
CCTTTTATCCCTTATTAGAAAAAGTGGCAAAAACAGGCAAGCCGGTGATT20.17809439002671415No Hit
CTCCTAAGGCAACAGAAACTACTGGGGCGAGTATTCCCAATGTATGGTCC20.17809439002671415No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT20.17809439002671415No Hit
ATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAGCT20.17809439002671415No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT20.17809439002671415No Hit
CTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTTTT20.17809439002671415No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)