FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004916685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004916685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1123
Sequences flagged as poor quality0
Sequence length125
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAGCCTTGGTAGGGATAGATAGCCACCTATATAGTATAGCTTCCCA40.3561887800534283No Hit
GCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAA30.26714158504007124No Hit
CAACTATACCAAAGAATATCCCAATTATCCATAAAACTGTAACTAAGTGA30.26714158504007124No Hit
GGTATCAACGCAGAGTACATGGGGGTTAAGCGACTAAGCGTACACGGTGG30.26714158504007124No Hit
CATATCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCT30.26714158504007124No Hit
CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCG20.17809439002671415No Hit
GTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCC20.17809439002671415No Hit
ATATACGGCTGTTGCAGCAGGCTTTCCGGCAGAACGCATCCACTTTCATG20.17809439002671415No Hit
TAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCT20.17809439002671415No Hit
TACTGCGAGGGATCCTTTCCCTGCCCTGTTTGCCCACCAAACTCACTCCG20.17809439002671415No Hit
CATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACA20.17809439002671415No Hit
TTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAA20.17809439002671415No Hit
CAGTAGCGGCGAGCGAACGGGGAGCAGCCCATGTACTCTGCGTTGATACC20.17809439002671415No Hit
ATCAACGCAGAGTACATGGGGGAATCTCGGTTGATTTCTTTCTGTCTCTT20.17809439002671415No Hit
AGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTTCGGGTTGTAAA20.17809439002671415No Hit
CCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCTTG20.17809439002671415No Hit
ATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAA20.17809439002671415No Hit
AGTGCGACCGTACAGCTCTGGAACCCAAAGGTTCGTTTTTTTCTTGGTAC20.17809439002671415No Hit
TCGTCGCTCTTCGTTGTTCGTCGACTTCTAGTGTGGAGACGAATTGCCAG20.17809439002671415No Hit
ACGCAGAGTACATGGGCACAGGTGGTCAGGTAGAGAATACCCTGTCTCTT20.17809439002671415No Hit
TCCGAGTTCAGTGCGACCGTACAGCTCTGGAACCCAAAGGTTCGTTTTTT20.17809439002671415No Hit
GGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGA20.17809439002671415No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA20.17809439002671415No Hit
CCGTTACCCCACCTACCCCATGTACTCTGCGTTGATACTGTCTCTTATAC20.17809439002671415No Hit
GTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTG20.17809439002671415No Hit
TCTTTGCGAAGTCCGAGTCCAAGTTCTTCTAGTCTCGCTTTCACTTCTTC20.17809439002671415No Hit
GGCATCTATCACATAAGGCATCATTATAACTAAAAATGGGATATATTCCT20.17809439002671415No Hit
GGTAGAAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATCTCCTCA20.17809439002671415No Hit
TCACCTTACCGACGCTTATCGCAGATTAGCACGTCCTTCATCGCCTCTGA20.17809439002671415No Hit
GTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAA20.17809439002671415No Hit
GGTATAGTTGGGATTTTAATATCATTAATAGCACTGTCTCTTATACACAT20.17809439002671415No Hit
GCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGA20.17809439002671415No Hit
GCATTCATGAAATCAACACACAGCTTTCCACTGTCATTCGCCATAGAAGC20.17809439002671415No Hit
ATTAGGGCTGAAAGCCCTAACTTAATGGACGGGAGGTATCCCAATAGGAG20.17809439002671415No Hit
GTCTTAACTGGGCGTTAAGTTGCAGGGTATAGACCCGAAACCCCTGTCTC20.17809439002671415No Hit
TTAGATTGGAGTATCCTCCATATCTACAAATTGCTTTGGATGTCCCAACT20.17809439002671415No Hit
GGTTTATACTTCAATATAAGCCTTGGTAGGGATAGATCTGTCTCTTATAC20.17809439002671415No Hit
AATTGGAGCTTTCTTAGCTGTCTTAGCAGTAGTTTATAAGGAATATATCC20.17809439002671415No Hit
ATAAAACTGTAACTAAGTGAGGCTCTCTCATTGGTTTATACTTCAATATA20.17809439002671415No Hit
AATCAATTAAATGCAGAATTAAATCCGCTTCTTTTACTTCCTCAAGCGTT20.17809439002671415No Hit
GGTCCCCCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGA20.17809439002671415No Hit
GGGTGTACACCGCCCTTAGACGTCTTGGTATACGGACAACTGATGGACCC20.17809439002671415No Hit
GCCCAGATGCGAGGTGGAAAAGTCACACTAGAGCGACACCAACATCGTTA20.17809439002671415No Hit
TCCCTATACGCGATGGATCGAGGTCATGACTGGACACTGCATCGGCTGTC20.17809439002671415No Hit
GCACTACGGTGCTGAAGCAACAAATGTCCTGCTTCCAGGAAAAGCCTCTA20.17809439002671415No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACATACTGAT20.17809439002671415No Hit
CAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCC20.17809439002671415No Hit
GGCAGGACCATTTTTCTGGTCATCGGGTCCAGCGTGGCAAACAGGAGGTC20.17809439002671415No Hit
TCCCTACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCAC20.17809439002671415No Hit
GCTTAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCCCG20.17809439002671415No Hit
GGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTT20.17809439002671415No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTA20.17809439002671415No Hit
TTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTTTTATGGAT20.17809439002671415No Hit
TATCAATTGCGTGCGGTCAATCATCTTCACTTCAATTGCTGTTGCCAATG20.17809439002671415No Hit
AATAGGTACCAAGAAAAAAACGAACCTTTGGGTTCCAGAGCTGTACGGTC20.17809439002671415No Hit
ATGTAGCGGCGTCAGCCCTGTTCCGTTTTTGTGTGACGCTGGTCAGTACT20.17809439002671415No Hit
CTCTCGTATCGAGGTTAAGGCAGATTAGTGCCCAGTAATTGCGTTTTTTT20.17809439002671415No Hit
CAGTTTTATGGATAATTGGGATATTCTTTGGTATAGTTGGGATTTTAATA20.17809439002671415No Hit
GACCATACATTGGGAATACTCGCCCCAGTAGTTTCTGTTGCCTTAGGAGC20.17809439002671415No Hit
GATTTTCAATGCAAGCTTTTTAATGTGTAAGATAATCGTTGTAACATCTT20.17809439002671415No Hit
GTTAAGCTCTGCACCTGTTACACTATAGTCATCGTCCATAACACGATCTA20.17809439002671415No Hit
ACCAATTGGAGCTTTCTTAGCTGTCTTAGCAGTAGTTTATAAGGAATATA20.17809439002671415No Hit
GTACATGGGCTGCTCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTT20.17809439002671415No Hit
GCACCGTAGTGCCTCGTCATCACGCCTCAGCCTTGATTTTCCGGATTTCC20.17809439002671415No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC20.17809439002671415No Hit
CCAAAGAATATCCCAATTATCCATAAAACTGTAACTAAGTGAGGCTCTCT20.17809439002671415No Hit
GGGATAATTGCGCGGTTTTGACTGCGGAAGGAAGCCAAGGCCCACCTAAA20.17809439002671415No Hit
GTATCAACGCAGAGTACATGGGTAATGGGTCAGCGACTTATATTCTGTAG20.17809439002671415No Hit
GTATAATGTCTCGGACCCGTCGCAACGGTTGTTAATATGACAGGCCGCTA20.17809439002671415No Hit
CTATACCAAAGAATATCCCAATTATCCATAAAACTGTAACTAAGTGAGGC20.17809439002671415No Hit
ATTTAAGGTAAAGTGCTTCTCAATAACATCCGCTCCTAAGGCAACAGAAA20.17809439002671415No Hit
CTTAAAGCGTGCGGGTATTAACACGGTTCAAGAGCTTGCGAACAAGACGG20.17809439002671415No Hit
TTCCATGCCTAGATGTGATACACGTTTCTGGAAACTGCCTCGTCCTGTCT20.17809439002671415No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACCGGCTAAC20.17809439002671415No Hit
GTTCGCCTCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACAC20.17809439002671415No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT20.17809439002671415No Hit
ATATCATATCCAAGATAGTGTAGGACTCGTCGCATTGGATGACGATGCCT20.17809439002671415No Hit
CCTTATACAGAATTATCAATCCAGCTCCCCGAGGAGCGGACTTGTAAGGA20.17809439002671415No Hit
GTACACCGCCCTTAGACGTCTTGGTATACGGACAACTGATGGACACGTTG20.17809439002671415No Hit
GATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTGC20.17809439002671415No Hit
CCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCAT20.17809439002671415No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT20.17809439002671415No Hit
GCATACCCAACATAGTAAAAACCATCAATAATGCAAATACCGTTACCACA20.17809439002671415No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)