EGAF00004917758 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004917758
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1354336
Sequences flagged as poor quality	0
Sequence length	125
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6213	0.4587487890744985	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3273	0.24166824185431088	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	2955	0.21818810103253547	No Hit
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	2676	0.1975876001228646	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2641	0.19500330789405287	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	2550	0.1882841480991423	No Hit
TGAAATACAGAGAAAAAGGCATCCCAAAACAACCCCACGTACTGCAGTCA	1953	0.14420350636769605	No Hit
GGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGG	1889	0.1394779434350117	No Hit
TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	1525	0.11260130425536942	No Hit
ATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC	1409	0.10403622143987903	No Hit
GTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGG	1404	0.10366703683576306	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACAGAG	1825	73.94533	6
AAAGGTC	1285	68.93359	7
TAACAAG	845	68.24374	6
AATACAG	2150	66.63867	4
ATACAGA	2130	66.14797	5
GTATCAA	7520	65.42754	1
GGTATCA	3910	61.089417	1
AGGTCAA	1425	60.492413	9
CATAAAA	1840	59.44944	2
GAAATAC	2665	58.445602	2
ACAGAGA	2405	56.606743	7
AAGGTCA	1540	56.36116	8
CAGAGAA	2410	55.25591	8
AAATACA	2615	54.788967	3
TGAAATA	2860	54.1509	1
TAAAAAG	1720	53.919262	4
CATGTAA	735	52.574333	2
AACAAGC	1110	52.486893	7
AGAGAAA	2610	51.249516	9
TATCAAC	10390	47.54811	2