EGAF00004917770 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004917770
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2309822
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29542	1.2789730117732017	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18322	0.7932212958401124	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16866	0.7301861355550342	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7121	0.30829215411404	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6630	0.28703510486955275	No Hit
TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	3949	0.17096555492154805	No Hit
ACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGC	3644	0.15776107422996233	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3598	0.15576957878139527	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3421	0.14810665064234385	No Hit
ATTCTAAGGCGCTTGAGAGAACTCAGGAGAAGGAACTCGGCAAATTGACA	2916	0.1262434940874232	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	2664	0.11533356249962118	No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGACTTCAATCAAG	2521	0.10914260925733671	No Hit
CCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACA	2421	0.10481327132566924	No Hit
ATATACGACACTCTTTCCCATGTACTCTGCGTTGATACCTGTCTCTTATA	2377	0.10290836263573556	No Hit
ATATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2359	0.10212908180803543	No Hit
CCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACA	2337	0.10117662746306859	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATATCAA	1900	75.76324	1
AGTATCA	1715	64.51276	1
ATACATG	1855	60.60587	1
TATACGA	1515	53.00513	2
ACAGAGT	675	52.874256	1
ATCTACA	1690	52.44406	2
ATATACG	1565	51.691765	1
TACACGA	820	44.97633	5
GACACTC	1925	42.95454	7
TACGACA	1880	42.715164	4
ATACGAC	1945	42.20517	3
AGATCTA	680	41.98929	5
GATCTAC	1725	41.724686	1
TCTACAC	2375	41.576763	3
TACACAG	695	41.083042	5
ATCCTAA	335	40.839443	1
ACGACAC	2155	37.816338	5
GTATCAA	33685	36.07685	1
CACGATA	735	35.611504	7
GAGATCT	765	34.991074	4