FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004918483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004918483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences659155
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT74181.1253802216474122No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT46130.6998353953167313No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20450.3102456933498191No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20230.30690808686879417No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19330.29325424217369206No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13750.2086004050640593No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG8310.12607049935144238No Hit
GGAACATGGTGAAATTGATGGGGCCTGGAGCCTCATTCATCATGGCATCT7630.11575426113736526No Hit
CCAAACATGGTGAGGAACATGGTGAAATTGATGGGGCCTGGAGCCTCATT7110.10786537309130628No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)