EGAF00004918616 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918616
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4118221
Sequences flagged as poor quality	0
Sequence length	150
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACG	9050	0.21975508356642348	No Hit
GTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGG	7297	0.17718815964466209	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAA	6995	0.16985489608255605	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACCAC	5930	0.14399421497777803	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5467	0.13275149633786043	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACC	4659	0.11313137395977536	No Hit
GGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGA	4644	0.11276713901463764	No Hit
TCGTGAGACAGTTCGGTCCCTATCTGCCGTGGACGTTTGAGATTTGAGAG	4627	0.11235433941014822	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAA	4315	0.10477825255128367	No Hit
GCTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATAC	4170	0.10125731474828573	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	40485	43.049805	1
CTATTGA	2135	33.383514	9
TTTAGGG	2250	33.277508	2
CAACGCA	53055	32.70244	5
TATCAAC	53415	32.63109	2
ATTTAGG	2220	32.479164	1
TATGGTG	3685	32.04024	4
ATCAACG	55375	31.43672	3
TCAACGC	55805	31.142508	4
GTGGGTA	3910	30.933369	8
AACGCAG	56470	30.584536	6
CGCAGAG	56890	30.460346	8
ACGCAGA	57090	30.290955	7
GCAGAGT	57390	30.031887	9
TGGGTAG	4130	29.28559	9
GCTATTG	2685	27.081442	8
GTGTATG	5065	27.033422	1
GTATGGT	5635	25.424583	3
GGTATCA	33275	24.645802	1
ACTGTGC	2220	24.322206	8