EGAF00004918645 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918645
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1073883
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4535	0.42229926351380925	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2716	0.2529139580382593	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	2682	0.2497478775620808	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	2022	0.18828866831861574	No Hit
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	1721	0.16025954410303542	No Hit
GGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGG	1498	0.13949378097986465	No Hit
GTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGT	1429	0.1330685000135024	No Hit
TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	1304	0.12142849826284614	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1283	0.11947297796873588	No Hit
GTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGG	1113	0.10364257558784337	No Hit
CGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGC	1090	0.10150081526572262	No Hit
GACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGG	1083	0.10084897516768586	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTAAG	220	78.5218	1
GGTATCA	2870	71.19132	1
GTATCAA	6350	70.731445	1
AAAGGTC	915	70.169304	7
TACAGAG	1350	68.25625	6
ATACAGA	1435	65.041756	5
AATACAG	1485	64.45312	4
CGTACGG	240	54.49491	2
AAGGTCA	1145	53.997337	8
TATCAAC	8420	53.518215	2
ACAGAGA	1735	53.452694	7
ATCAACG	8575	52.82814	3
CAGAGAA	1750	52.65482	8
AGGTCAA	1175	52.618683	9
TCAACGC	8935	51.165386	4
CATAAAA	1675	50.043633	2
TCATGTA	490	49.842827	1
AACGCAG	9195	49.78328	6
CAACGCA	9225	49.62138	5
GAAATAC	2080	48.302307	2