FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004918680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004918680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103212
Sequences flagged as poor quality0
Sequence length101
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG1610.15598961361082045No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA1310.126923225981475No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG1070.1036701158779987No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)