FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004918687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004918687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5580560
Sequences flagged as poor quality0
Sequence length125
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT192090.34421276717748756No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT115760.20743437934544204No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT113540.20345628395716558No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)