EGAF00004918844 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918844
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4619812
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	20466	0.4430050400319321	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	11419	0.24717456035007485	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	10427	0.22570182509591297	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10073	0.21803917562013345	No Hit
TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	7754	0.16784232778303532	No Hit
GTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGT	7713	0.16695484578160324	No Hit
ATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC	7685	0.16634876051233252	No Hit
CGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGC	6890	0.1491402680455395	No Hit
CATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACA	6575	0.14232180876624417	No Hit
GGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGG	6500	0.14069836608069766	No Hit
GACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGG	6008	0.13004858206351255	No Hit
GTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGG	5818	0.12593586059346137	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5355	0.11591380774802092	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	4946	0.10706063363617395	No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG	4876	0.1055454204629972	No Hit
CTTCAAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTC	4864	0.10528566963330975	No Hit
GTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGG	4677	0.10123788587068044	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	21450	89.9651	1
GGTATCA	10065	73.2488	1
ATCAACG	34170	56.5083	3
TATCAAC	34680	56.113083	2
AACGCAG	35270	55.07299	6
CGCAGAG	35450	54.44823	8
ACGCAGA	35545	54.403946	7
TCAACGC	35585	54.200634	4
GCAGAGT	35685	53.894157	9
CAACGCA	36075	53.744312	5
ACTGTGC	10655	40.188774	8
CACTGTG	10335	39.204792	7
CTGTGCA	10255	38.868927	9
ACAGCAC	12500	32.81719	3
TAGATGG	1050	32.21438	7
ACACAGC	12510	31.69738	1
GCACTGT	13085	31.240347	6
CAGAGTA	36435	31.023146	9
AGCACTG	13860	30.06468	5
TTCTCTG	1065	29.057623	7