EGAF00004918881 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918881
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3378922
Sequences flagged as poor quality	0
Sequence length	125
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34857	1.031601202987225	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23684	0.7009336113707271	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17770	0.525907375192443	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	8947	0.2647885923380297	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7444	0.22030694996806674	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5431	0.1607317363348429	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3843	0.11373449875433643	No Hit
ACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGC	3623	0.10722354644469448	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	3577	0.10586216550722391	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATATACG	1640	54.768135	1
TATACGA	1730	50.88742	2
ATACGAC	1835	47.9749	3
GATCTAC	1885	47.01861	1
GTATCAA	46635	40.54837	1
TCTACAC	2885	39.998558	3
GACACTC	2205	38.036922	7
ATCTACA	2630	37.54457	2
TACGACA	2355	36.623978	4
GGTATCA	31060	36.291306	1
TACACGA	985	34.421284	5
TATCAAC	56260	34.30914	2
ACGACAC	2615	32.98259	5
ATCAACG	59510	32.604866	3
TCAACGC	59830	32.410595	4
CAACGCA	60915	31.804012	5
AACGCAG	61465	31.518959	6
TACACAG	1155	31.414942	5
ATACATG	1665	30.009579	1
CTACACA	1590	29.928247	4