EGAF00004918896 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918896
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2201748
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	9693	0.44024111751208583	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	5298	0.2406269927348634	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	4606	0.20919741950486612	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4291	0.19489060510103792	No Hit
TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	3610	0.16396063491371402	No Hit
GTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGT	3536	0.160599668990275	No Hit
ATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC	3478	0.15796539840163362	No Hit
GGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGG	3468	0.1575112138173851	No Hit
GACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGG	3240	0.14715580529651895	No Hit
CGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGC	2869	0.13030555722089904	No Hit
GTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGG	2613	0.11867843186413704	No Hit
GTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGG	2597	0.11795173652933942	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	2498	0.11345530914527913	No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG	2401	0.10904971867806852	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	2275	0.10332699291653723	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	10940	85.68726	1
GGTATCA	5515	77.42921	1
TATCAAC	16430	57.436146	2
AACGCAG	17480	53.949787	6
ATCAACG	17505	53.83165	3
ACGCAGA	17830	52.890766	7
CGCAGAG	17920	52.384285	8
TCAACGC	18160	51.85042	4
GCAGAGT	18100	51.306942	9
CAACGCA	18420	51.274754	5
ACTGTGC	5670	38.440414	8
CTGTGCA	5455	37.054424	9
CACTGTG	5655	36.63434	7
AGCACTG	6440	31.945427	5
GGGCTAT	1390	31.567743	6
GCACTGT	6515	31.246437	6
ACAGCAC	6420	31.036537	3
CTATTGA	1420	30.90082	9
GCTATTG	1425	30.792397	8
ACACAGC	6255	30.483406	1