EGAF00004918901 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918901
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2732520
Sequences flagged as poor quality	0
Sequence length	125
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31322	1.146267913867053	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18820	0.6887415279668584	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11645	0.4261633949614275	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	9321	0.34111369724649776	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	8450	0.30923835873113464	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	4431	0.1621580079926222	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3972	0.14536032673136884	No Hit
TTCTCATTCTTCCTTCCTGTCTTGCTACCCTCACAGCCTCATCCAAAAGA	3826	0.14001727343258238	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3816	0.13965131087787097	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3364	0.1231098034049156	No Hit
GTGCTGGAAGATTAAATGATGGGGTGCAAGCTCTTGATTGAAGTCCCAGT	3272	0.11974294790157072	No Hit
TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	3206	0.11732759504047546	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3115	0.1139973357926017	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	3061	0.11202113799716014	No Hit
GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTA	3003	0.10989855517983399	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATACGA	1270	65.10241	2
GATCTAC	1495	64.85454	1
ATATACG	1220	54.60748	1
ATCTACA	1855	53.87054	2
GACACTC	1670	50.218624	7
TACGACA	1715	49.943207	4
ATACGAC	1770	47.719196	3
TCTACAC	2400	45.602077	3
ACGACAC	2055	41.39065	5
GTATCAA	47890	41.261852	1
TACACGA	905	39.434895	5
GTATACG	470	39.233562	1
CTACACG	1000	36.878204	4
TATCAAC	55630	35.402676	2
CACGATA	690	35.342472	7
ATCAACG	57545	34.182564	3
TACACAG	855	34.08851	5
ACGATAT	720	33.86987	8
TCAACGC	58380	33.714035	4
CGATATA	725	33.63628	9